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Intron Name: Anas_platyrhynchos_platyrhynchos_1_161815846_161817229_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

161815846 - 161817229

Intron Length:

1384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTGTTTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

GGCCACTTAAAT

Flanking Amino Acid:

ESINEEIHMRLMDHFKAGIE

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.6

33.2

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

88.6

0.87

0.7

81.3

36.4

Minor 5ss

47.4

-0.3

2.8

63.8

41.6

Minor BPS

52.5

0.16

1.7

65.96

43.5

Associated Gene:

Gene:

SLC9A4

Ensembl Gene ID:

ENSAPLG00000005368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005535

161800998 - 161834833

33836