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Intron Name: Anas_platyrhynchos_platyrhynchos_1_161817317_161818013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

161817317 - 161818013

Intron Length:

697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

GTTCCAAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

ATATTATTAACA

Flanking Amino Acid:

VVIYFTVFIQGITIGPLVRY

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

81.9

0.79

0.8

81.9

Major PPT

67.3

0.39

60.1

39.6

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

0.56

1.5

75.86

34.5

Associated Gene:

Gene:

SLC9A4

Ensembl Gene ID:

ENSAPLG00000005368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005535

161800998 - 161834833

33836