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Intron Name: Anas_platyrhynchos_platyrhynchos_1_161831436_161834568_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

161831436 - 161834568

Intron Length:

3133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTAATTTAAACT

Flanking Amino Acid:

WILLASLAKIGFHLYHRLPR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.6

92.3

16.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

0.56

1.1

79.2

38.4

Minor 5ss

-1.7

2.7

41.8

44.8

Minor BPS

59.1

0.36

1.7

76.79

39.9

Associated Gene:

Gene:

SLC9A4

Ensembl Gene ID:

ENSAPLG00000005368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005535

161800998 - 161834833

33836