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Intron Name: Anas_platyrhynchos_platyrhynchos_1_161884294_161884905_R

Intron Information:

Intron Rank:

134681

Intron Class:

major

Intron Phase:

Intron Coordinates:

161884294 - 161884905

Intron Length:

612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTCC

5'SS Class:

major

3'SS Sequence:

TTGCTTTTTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAA

U12 Branch Point Sequence:

TGCTTTTTCAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

69.4

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

76.1

0.59

75.1

38.8

Minor 5ss

38.1

-1.3

3.2

51.4

45.3

Minor BPS

46.7

-0.4

1.9

52.19

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019784

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038816

161884201 - 161885567

1367