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Intron Name: Anas_platyrhynchos_platyrhynchos_1_161890997_161894218_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

161890997 - 161894218

Intron Length:

3222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCATTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TTGTGCATTATA

Flanking Amino Acid:

IYGRDTYPGEDKASAIEKRI

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

65.3

0.38

71.6

30.1

Major PPT

72.9

0.51

0.9

66.4

39.5

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

46.1

-0.3

2.3

63.82

42.6

Associated Gene:

Gene:

IL1RL1

Ensembl Gene ID:

ENSAPLG00000004919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022891

161886422 - 161913020

26599

ENSAPLT00000020032

161887534 - 161913020

25487

ENSAPLT00000005088

161886497 - 161914849

28353

ENSAPLT00000039490

161886497 - 161913020

26524