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Intron Name: Anas_platyrhynchos_platyrhynchos_1_161894378_161895059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

161894378 - 161895059

Intron Length:

682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTACCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

CTTGCTCTACCT

Flanking Amino Acid:

EIFQPYSVKDDGKIYDAYVI

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.8

35.2

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

79.6

0.67

0.8

31.5

Minor 5ss

29.8

-2.3

2.6

30.2

36.8

Minor BPS

48.6

-0

2.1

71.75

45.6

Associated Gene:

Gene:

IL1RL1

Ensembl Gene ID:

ENSAPLG00000004919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022891

161886422 - 161913020

26599

ENSAPLT00000020032

161887534 - 161913020

25487

ENSAPLT00000005088

161886497 - 161914849

28353