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Intron Name: Anas_platyrhynchos_platyrhynchos_1_161895204_161901975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

161895204 - 161901975

Intron Length:

6772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGGTA

5'SS Class:

major

3'SS Sequence:

CTCTTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TAACACTTCATT

Flanking Amino Acid:

ATVTLQLKAQSDHPNVLMIV

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

75.2

34.6

Major BPS

78.6

0.71

79.6

32.9

Major PPT

88.4

0.86

0.7

83.8

24.4

Minor 5ss

35.2

-1.7

3.8

50.9

46.1

Minor BPS

49.2

0.02

1.9

68.88

41.6

Associated Gene:

Gene:

IL1RL1

Ensembl Gene ID:

ENSAPLG00000004919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022891

161886422 - 161913020

26599

ENSAPLT00000020032

161887534 - 161913020

25487

ENSAPLT00000005088

161886497 - 161914849

28353