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Intron Name: Anas_platyrhynchos_platyrhynchos_1_161902346_161904246_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

161902346 - 161904246

Intron Length:

1901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

GCATCTTGGTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

CTCTCCGCATCT

Flanking Amino Acid:

KEKDVIEVELGAPLSLKCQA

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.8

82.4

29.8

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

57.6

0.17

1.1

57.8

Minor 5ss

36.2

-1.6

2.6

40.7

39.2

Minor BPS

45.2

-0.2

2.4

67.57

48.9

Associated Gene:

Gene:

IL1RL1

Ensembl Gene ID:

ENSAPLG00000004919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020032

161887534 - 161913020

25487

ENSAPLT00000005088

161886497 - 161914849

28353

ENSAPLT00000039490

161886497 - 161913020

26524

ENSAPLT00000031548

161900429 - 161913020

12592

ENSAPLT00000022891

161886422 - 161913020

26599