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Intron Name: Anas_platyrhynchos_platyrhynchos_1_161904316_161906832_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

161904316 - 161906832

Intron Length:

2517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTCTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTCTCTTTAATT

Flanking Amino Acid:

VSATRIFISEAKHLSLPAQI

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

76.9

33.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

72.1

0.5

1.1

76.2

37.8

Minor 5ss

31.3

-2.1

38.6

46.4

Minor BPS

76.8

0.92

1.2

82.98

39.3

Associated Gene:

Gene:

IL1RL1

Ensembl Gene ID:

ENSAPLG00000004919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031548

161900429 - 161913020

12592

ENSAPLT00000022891

161886422 - 161913020

26599

ENSAPLT00000020032

161887534 - 161913020

25487

ENSAPLT00000005088

161886497 - 161914849

28353

ENSAPLT00000039490

161886497 - 161913020

26524