Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_161971849_161972585_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

161971849 - 161972585

Intron Length:

737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTAATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAA

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

LILLIPLFSAEECIVCDYFV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

64.3

0.36

71.3

30.3

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004478

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004621

161957825 - 161976794

18970