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Intron Name: Anas_platyrhynchos_platyrhynchos_1_161972653_161973939_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

161972653 - 161973939

Intron Length:

1287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGACTG

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

ATCACATTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

60.8

43.6

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

41.8

-0.9

3.1

53.4

44.7

Minor BPS

55.7

0.04

1.7

59.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004478

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004621

161957825 - 161976794

18970