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Intron Name: Anas_platyrhynchos_platyrhynchos_1_161990505_162018011_F

Intron Information:

Intron Rank:

149516

Intron Class:

major

Intron Phase:

Intron Coordinates:

161990505 - 162018011

Intron Length:

27507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

AAAAATTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

86.6

0.82

0.7

80.5

31.5

Minor 5ss

-1

2.7

45.9

42.3

Minor BPS

49.7

0.06

1.6

64.16

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029927

161990448 - 162020612

30165