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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162018121_162020137_F

Intron Information:

Intron Rank:

149517

Intron Class:

major

Intron Phase:

Intron Coordinates:

162018121 - 162020137

Intron Length:

2017

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAGAT

U12 Branch Point Sequence:

TTTTCCCCCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.8

35.1

Major BPS

58.9

0.22

1.2

54.7

43.1

Major PPT

75.5

0.57

0.8

69.9

29.7

Minor 5ss

-2.2

3.6

43.1

45.5

Minor BPS

47.1

-0.3

2.3

64.35

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029927

161990448 - 162020612

30165