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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162028200_162029522_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162028200 - 162029522

Intron Length:

1323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAGC

5'SS Class:

major

3'SS Sequence:

TTTACTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCTTTACTT

Flanking Amino Acid:

QVLPTRVKQEAVGLSWYIAV

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

69.7

40.9

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

88.5

0.87

0.7

80.9

36.6

Minor 5ss

32.7

-2

3.1

43.6

43.7

Minor BPS

71.4

0.75

1.5

85.82

34.8

Associated Gene:

Gene:

IL1R2

Ensembl Gene ID:

ENSAPLG00000004200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029108

162027884 - 162037770

9887

ENSAPLT00000004311

162027884 - 162039420

11537