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Intron Name: Anas_platyrhynchos_platyrhynchos_1_16205796_16208167_F

Intron Information:

Intron Rank:

132117

Intron Class:

major

Intron Phase:

Intron Coordinates:

16205796 - 16208167

Intron Length:

2372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

76.1

0.9

1.1

87.86

31.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039133

16205728 - 16210138

4411