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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162065155_162065565_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

162065155 - 162065565

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCAGGACTT

5'SS Class:

major

3'SS Sequence:

GAGTGGACAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTATCATGAACA

Flanking Amino Acid:

GSSQVYFMTLGRQEKVRSGV

Intron Amino Acid Position:

1382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.57

1.1

69.7

40.3

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

41.3

-0.5

1.7

33.7

40.4

Minor 5ss

26.3

-2.7

4.3

44.2

44.6

Minor BPS

66.5

0.51

1.7

79.11

36.2

Associated Gene:

Gene:

MAP4K4

Ensembl Gene ID:

ENSAPLG00000003218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003379

162065108 - 162196289

131182