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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162065910_162067659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162065910 - 162067659

Intron Length:

1750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTTCTCCCCACA

Flanking Amino Acid:

LQWGEMPTSVAYIRSNQIMG

Intron Amino Acid Position:

1316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

81.9

0.79

0.9

80.1

Major PPT

82.4

0.73

0.7

76.9

25.2

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

45.1

-0.3

2.2

65.62

40.5

Associated Gene:

Gene:

MAP4K4

Ensembl Gene ID:

ENSAPLG00000003218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003379

162065108 - 162196289

131182

ENSAPLT00000045028

162065175 - 162196289

131115

ENSAPLT00000038301

162065175 - 162181743

116569

ENSAPLT00000036557

162065175 - 162181743

116569

ENSAPLT00000025761

162065175 - 162196289

131115

ENSAPLT00000046859

162065175 - 162181743

116569