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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162076582_162079978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162076582 - 162079978

Intron Length:

3397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TGCCTACTAACT

Flanking Amino Acid:

NSEILCAALWGVNLLVGTES

Intron Amino Acid Position:

1086

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

76.9

33.7

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

70.7

0.47

63.3

43.2

Minor 5ss

32.3

-2

2.9

32.2

42.1

Minor BPS

47.9

-0

1.9

68.07

42.1

Associated Gene:

Gene:

MAP4K4

Ensembl Gene ID:

ENSAPLG00000003218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036557

162065175 - 162181743

116569

ENSAPLT00000025761

162065175 - 162196289

131115

ENSAPLT00000046859

162065175 - 162181743

116569

ENSAPLT00000003379

162065108 - 162196289

131182

ENSAPLT00000045028

162065175 - 162196289

131115

ENSAPLT00000038301

162065175 - 162181743

116569