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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162080150_162080419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162080150 - 162080419

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TGCACGTTACTT

Flanking Amino Acid:

PSSGTTVTSVVGFSSEAMRS

Intron Amino Acid Position:

1029

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

83.2

30.8

Major BPS

73.9

0.59

30.2

Major PPT

93.4

0.98

0.5

92.6

17.4

Minor 5ss

34.6

-1.8

2.7

41.5

Minor BPS

46.1

-0.2

2.3

64.88

45.9

Associated Gene:

Gene:

MAP4K4

Ensembl Gene ID:

ENSAPLG00000003218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003379

162065108 - 162196289

131182

ENSAPLT00000045028

162065175 - 162196289

131115

ENSAPLT00000038301

162065175 - 162181743

116569

ENSAPLT00000036557

162065175 - 162181743

116569

ENSAPLT00000025761

162065175 - 162196289

131115

ENSAPLT00000046859

162065175 - 162181743

116569