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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162080538_162082916_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162080538 - 162082916

Intron Length:

2379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTACATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTGTCATTAATA

Flanking Amino Acid:

TPQDKLTTNETQSASNTLQK

Intron Amino Acid Position:

990

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

83.5

35.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.3

0.64

0.9

71.3

38.5

Minor 5ss

46.2

-0.4

2.8

67.2

43.9

Minor BPS

73.3

0.73

1.5

80.55

35.3

Associated Gene:

Gene:

MAP4K4

Ensembl Gene ID:

ENSAPLG00000003218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038301

162065175 - 162181743

116569

ENSAPLT00000036557

162065175 - 162181743

116569

ENSAPLT00000003379

162065108 - 162196289

131182

ENSAPLT00000046859

162065175 - 162181743

116569

ENSAPLT00000045028

162065175 - 162196289

131115