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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162106260_162106947_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162106260 - 162106947

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

ACTACCTGGACC

Flanking Amino Acid:

DRTRKKRGEKDETEYEYSGS

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.8

42.3

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

76.7

0.6

0.9

77.7

31.1

Minor 5ss

45.8

-0.4

2.6

60.7

Minor BPS

58.5

0.25

1.6

65.81

39.6

Associated Gene:

Gene:

MAP4K4

Ensembl Gene ID:

ENSAPLG00000003218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036557

162065175 - 162181743

116569

ENSAPLT00000025761

162065175 - 162196289

131115

ENSAPLT00000046859

162065175 - 162181743

116569

ENSAPLT00000003379

162065108 - 162196289

131182

ENSAPLT00000045028

162065175 - 162196289

131115

ENSAPLT00000038301

162065175 - 162181743

116569