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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162107124_162109089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162107124 - 162109089

Intron Length:

1966

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAA

U12 Branch Point Sequence:

TGAACTTAAGTT

Flanking Amino Acid:

NPPPRLKSKKWSKKFFSFIE

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

79.9

34.9

Major BPS

65.6

0.39

0.9

55.7

32.1

Major PPT

84.4

0.77

0.7

83.2

25.1

Minor 5ss

36.5

-1.5

47.5

43.4

Minor BPS

46.2

-0.2

1.8

62.12

42.2

Associated Gene:

Gene:

MAP4K4

Ensembl Gene ID:

ENSAPLG00000003218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036557

162065175 - 162181743

116569

ENSAPLT00000025761

162065175 - 162196289

131115

ENSAPLT00000046859

162065175 - 162181743

116569

ENSAPLT00000003379

162065108 - 162196289

131182

ENSAPLT00000045028

162065175 - 162196289

131115

ENSAPLT00000038301

162065175 - 162181743

116569