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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162115071_162117679_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162115071 - 162117679

Intron Length:

2609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACGTCAT

U12 Branch Point Sequence:

TGAACGTCATCT

Flanking Amino Acid:

IAYISREILRGLAHLHAHHV

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

63.4

0.33

1.2

65.3

41.5

Major PPT

82.5

0.73

0.7

77.1

24.9

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

42.8

-0.4

2.4

63.04

46.2

Associated Gene:

Gene:

MAP4K4

Ensembl Gene ID:

ENSAPLG00000003218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025761

162065175 - 162196289

131115

ENSAPLT00000046859

162065175 - 162181743

116569

ENSAPLT00000003379

162065108 - 162196289

131182

ENSAPLT00000045028

162065175 - 162196289

131115

ENSAPLT00000038301

162065175 - 162181743

116569

ENSAPLT00000036557

162065175 - 162181743

116569