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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162117791_162118581_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162117791 - 162118581

Intron Length:

791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

GGTGCTTGCATG

Flanking Amino Acid:

SPPGHDDQLWLVMEFCGAGS

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

71.6

40.2

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

86.2

0.81

0.8

80.6

Minor 5ss

39.2

-1.2

2.8

41.9

44.5

Minor BPS

42.4

-0.7

1.9

45.2

41.6

Associated Gene:

Gene:

MAP4K4

Ensembl Gene ID:

ENSAPLG00000003218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038301

162065175 - 162181743

116569

ENSAPLT00000036557

162065175 - 162181743

116569

ENSAPLT00000025761

162065175 - 162196289

131115

ENSAPLT00000046859

162065175 - 162181743

116569

ENSAPLT00000003379

162065108 - 162196289

131182

ENSAPLT00000045028

162065175 - 162196289

131115