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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162138528_162180840_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

162138528 - 162180840

Intron Length:

42313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCTGCCCA

5'SS Class:

weak_major

3'SS Sequence:

CTCTCTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CGGTGCTGACGC

Flanking Amino Acid:

MGRHVKTGQLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.3

47.8

42.4

Major BPS

66.3

0.4

1.1

41.8

Major PPT

84.2

0.77

0.7

76.5

32.2

Minor 5ss

39.8

-1.1

2.8

45.9

44.1

Minor BPS

38.2

-0.9

2.2

43.13

44.3

Associated Gene:

Gene:

MAP4K4

Ensembl Gene ID:

ENSAPLG00000003218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046859

162065175 - 162181743

116569

ENSAPLT00000038301

162065175 - 162181743

116569

ENSAPLT00000036557

162065175 - 162181743

116569