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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162138528_162195730_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162138528 - 162195730

Intron Length:

57203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGGC

5'SS Class:

major

3'SS Sequence:

CTCTCTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CGGTGCTGACGC

Flanking Amino Acid:

GNGTYGQVYKGRHVKTGQLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.2

64.4

40.2

Major BPS

66.3

0.4

1.1

41.8

Major PPT

84.2

0.77

0.7

76.5

32.2

Minor 5ss

35.5

-1.6

44.6

43.2

Minor BPS

38.2

-0.9

2.2

43.13

44.3

Associated Gene:

Gene:

MAP4K4

Ensembl Gene ID:

ENSAPLG00000003218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003379

162065108 - 162196289

131182

ENSAPLT00000045028

162065175 - 162196289

131115

ENSAPLT00000025761

162065175 - 162196289

131115