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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162236474_162239429_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162236474 - 162239429

Intron Length:

2956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGCGTGCC

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TTTGTTTTAAAG

Flanking Amino Acid:

TSLLHLSITRWIADNFFLCE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

62.2

36.7

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

74.5

0.55

1.1

74.5

39.3

Minor 5ss

27.6

-2.6

3.2

32.4

37.2

Minor BPS

62.1

0.24

1.6

67.62

40.4

Associated Gene:

Gene:

RFX8

Ensembl Gene ID:

ENSAPLG00000022405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019198

162236408 - 162267053

30646