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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162246970_162248443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162246970 - 162248443

Intron Length:

1474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TATTTCACCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GCTTTTTTAAAT

Flanking Amino Acid:

AWELSTPTGSGGDACSSADA

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

67.6

39.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

76.6

0.6

0.9

70.4

34.6

Minor 5ss

28.6

-2.5

2.7

25.4

36.3

Minor BPS

67.4

0.62

1.4

77.19

39.4

Associated Gene:

Gene:

RFX8

Ensembl Gene ID:

ENSAPLG00000022405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019198

162236408 - 162267053

30646