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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162249615_162249698_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162249615 - 162249698

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TCACCTTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTTTTGTTCACC

Flanking Amino Acid:

ELAKKYPYEMVVLLANEYNN

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

34.4

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

77.8

0.62

0.8

69.2

36.7

Minor 5ss

42.8

-0.8

54.9

44.6

Minor BPS

55.2

0.14

2.4

77.35

39.1

Associated Gene:

Gene:

RFX8

Ensembl Gene ID:

ENSAPLG00000022405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019198

162236408 - 162267053

30646