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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162256434_162257955_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162256434 - 162257955

Intron Length:

1522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAATATTT

5'SS Class:

major

3'SS Sequence:

CTATATTTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

CTTTCTATATTT

Flanking Amino Acid:

DELQNDTEIKCLNDLISLLA

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

76.4

Major BPS

76.8

0.67

40.9

Major PPT

73.7

0.53

0.9

69.3

36.3

Minor 5ss

46.4

-0.4

3.1

70.1

40.3

Minor BPS

54.5

0.22

1.9

76.24

41.2

Associated Gene:

Gene:

RFX8

Ensembl Gene ID:

ENSAPLG00000022405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019198

162236408 - 162267053

30646