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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162297173_162299538_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162297173 - 162299538

Intron Length:

2366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGTG

5'SS Class:

strong_major

3'SS Sequence:

AATTTTATTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

AATACTTCAAAT

Flanking Amino Acid:

LYTGSQFGNQGHRKETKKAI

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

78.1

36.6

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

68.6

0.42

1.1

65.8

43.7

Minor 5ss

36.4

-1.5

3.3

49.3

46.9

Minor BPS

53.6

0.19

1.7

70.47

39.7

Associated Gene:

Gene:

RNF149

Ensembl Gene ID:

ENSAPLG00000003131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024870

162289970 - 162307414

17445

ENSAPLT00000003178

162289970 - 162307414

17445