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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162299608_162302462_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162299608 - 162302462

Intron Length:

2855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTGG

5'SS Class:

major

3'SS Sequence:

GTGTTATCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

GCACATTTAAAT

Flanking Amino Acid:

QLHTVKRGDKGLDVDVENCA

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

63.2

43.6

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

73.7

0.53

0.9

71.1

39.9

Minor 5ss

36.2

-1.6

3.2

47.4

Minor BPS

49.1

0.01

1.6

61.63

41.5

Associated Gene:

Gene:

RNF149

Ensembl Gene ID:

ENSAPLG00000003131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024870

162289970 - 162307414

17445

ENSAPLT00000003178

162289970 - 162307414

17445