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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162302546_162303028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162302546 - 162303028

Intron Length:

483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATTACGA

Flanking Amino Acid:

LKDTVRILPCKHIFHRTCID

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

75.1

35.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

85.8

0.81

0.7

85.6

29.2

Minor 5ss

36.2

-1.6

2.9

44.9

36.9

Minor BPS

51.5

0.04

2.1

70.86

41.2

Associated Gene:

Gene:

RNF149

Ensembl Gene ID:

ENSAPLG00000003131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003178

162289970 - 162307414

17445

ENSAPLT00000024870

162289970 - 162307414

17445