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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162303126_162305797_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162303126 - 162305797

Intron Length:

2672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTTGC

5'SS Class:

major

3'SS Sequence:

TTTAATTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATGTGTTTAATT

Flanking Amino Acid:

LDVIKALGYWGDSEDPLEVP

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

65.8

41.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

74.9

0.56

1.1

75.6

38.1

Minor 5ss

46.2

-0.4

2.5

52.5

44.7

Minor BPS

63.6

0.5

1.7

77.6

39.8

Associated Gene:

Gene:

RNF149

Ensembl Gene ID:

ENSAPLG00000003131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003178

162289970 - 162307414

17445