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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162316080_162318400_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162316080 - 162318400

Intron Length:

2321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATATTTTTAATT

Flanking Amino Acid:

MSLHSMEVVNRLTTAVDLPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

84.8

32.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.3

0.43

1.1

65.9

Minor 5ss

38.9

-1.3

2.8

53.8

42.8

Minor BPS

74.6

0.85

82.48

32.6

Associated Gene:

Gene:

CNOT11

Ensembl Gene ID:

ENSAPLG00000002957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002995

162313535 - 162320284

6750