Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_162348402_162360206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162348402 - 162360206

Intron Length:

11805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACCTGGG

5'SS Class:

major

3'SS Sequence:

TGTGTGGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

GHGDAGGRFTGRLVGALDAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.3

0.24

1.3

49.1

47.6

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

65.2

0.34

57.8

43.2

Minor 5ss

36.1

-1.6

3.3

40.6

45.6

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

TBC1D8

Ensembl Gene ID:

ENSAPLG00000000969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024218

162347809 - 162394579

46771