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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162366304_162369728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162366304 - 162369728

Intron Length:

3425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CCTGCAATGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TCTTCCTGCAAT

Flanking Amino Acid:

CFYSFFLGKELKLIIPWVEV

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.2

81.5

32.7

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

60.6

0.24

1.1

54.8

39.2

Minor 5ss

37.6

-1.4

3.3

48.3

41.3

Minor BPS

0.24

2.1

78.15

43.8

Associated Gene:

Gene:

TBC1D8

Ensembl Gene ID:

ENSAPLG00000000969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024218

162347809 - 162394579

46771

ENSAPLT00000001210

162347809 - 162394058

46250