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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162369970_162377277_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162369970 - 162377277

Intron Length:

7308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TTGCTCTTGATG

Flanking Amino Acid:

GLQDPTQITKRDLEARAQNE

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.9

36.7

Major BPS

83.8

0.84

73.6

41.8

Major PPT

71.7

0.49

32.9

Minor 5ss

34.5

-1.8

3.1

49.5

46.3

Minor BPS

61.3

0.21

1.3

63.08

39.5

Associated Gene:

Gene:

TBC1D8

Ensembl Gene ID:

ENSAPLG00000000969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024218

162347809 - 162394579

46771

ENSAPLT00000001210

162347809 - 162394058

46250