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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162377486_162378681_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

162377486 - 162378681

Intron Length:

1196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGTTG

5'SS Class:

major

3'SS Sequence:

GTTTCTGGGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TTTTCTGTCATG

Flanking Amino Acid:

CCNVIIPLREVISIEKMEDT

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

63.7

43.1

Major BPS

72.5

0.56

1.2

39.9

Major PPT

52.9

0.07

1.3

55.3

43.9

Minor 5ss

38.3

-1.3

3.7

54.5

49.7

Minor BPS

48.6

-0.2

2.4

66.31

42.6

Associated Gene:

Gene:

TBC1D8

Ensembl Gene ID:

ENSAPLG00000000969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024218

162347809 - 162394579

46771

ENSAPLT00000001210

162347809 - 162394058

46250