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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162382025_162387129_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162382025 - 162387129

Intron Length:

5105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TTATGACTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATGACT

Flanking Amino Acid:

LPDYFNHRVIGAQVDQSVFE

Intron Amino Acid Position:

596

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

37.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.5

0.62

0.9

70.6

39.9

Minor 5ss

37.8

-1.4

47.1

48.3

Minor BPS

0.62

1.5

87.41

31.4

Associated Gene:

Gene:

TBC1D8

Ensembl Gene ID:

ENSAPLG00000000969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024218

162347809 - 162394579

46771

ENSAPLT00000001210

162347809 - 162394058

46250