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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162390715_162391721_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162390715 - 162391721

Intron Length:

1007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACCACTC

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

ACTTCCTTATTG

Flanking Amino Acid:

IEFKGLASCLDVMYNGEMNE

Intron Amino Acid Position:

871

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.2

44.1

Major BPS

78.8

0.72

67.9

40.1

Major PPT

96.3

1.04

0.5

92.6

17.2

Minor 5ss

-1

3.4

59.9

44.6

Minor BPS

63.9

0.3

1.7

65.41

Associated Gene:

Gene:

TBC1D8

Ensembl Gene ID:

ENSAPLG00000000969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024218

162347809 - 162394579

46771

ENSAPLT00000001210

162347809 - 162394058

46250