Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_162391788_162392405_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162391788 - 162392405

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTGGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

CACTTCTCAATT

Flanking Amino Acid:

KLLYKLHIPPALTENERDSQ

Intron Amino Acid Position:

893

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

80.4

0.76

80.3

31.8

Major PPT

67.8

0.4

1.1

62.3

47.6

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

57.8

0.32

1.6

68.51

Associated Gene:

Gene:

TBC1D8

Ensembl Gene ID:

ENSAPLG00000000969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024218

162347809 - 162394579

46771

ENSAPLT00000001210

162347809 - 162394058

46250