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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162419329_162420051_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162419329 - 162420051

Intron Length:

723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

ACTTTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

TTTGTGAGAACT

Flanking Amino Acid:

SSHTPKSDPASTPTKLTAEA

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

59.6

39.9

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

89.1

0.88

0.7

84.5

29.6

Minor 5ss

29.6

-2.3

3.2

35.3

41.4

Minor BPS

-0.3

2.4

73.17

43.6

Associated Gene:

Gene:

NPAS2

Ensembl Gene ID:

ENSAPLG00000016315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032733

162401785 - 162447870

46086

ENSAPLT00000017044

162401785 - 162452677

50893