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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162421715_162422933_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162421715 - 162422933

Intron Length:

1219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TCTGTCCTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAC

U12 Branch Point Sequence:

TCTGTCCTGACA

Flanking Amino Acid:

LELLARCHEHLMQFGKGKSC

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

62.7

0.32

1.2

39.8

Major PPT

73.2

0.52

68.7

37.3

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

52.4

0.07

1.8

66.29

40.5

Associated Gene:

Gene:

NPAS2

Ensembl Gene ID:

ENSAPLG00000016315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032733

162401785 - 162447870

46086

ENSAPLT00000017044

162401785 - 162452677

50893