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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162423041_162423745_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162423041 - 162423745

Intron Length:

705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGTGAC

5'SS Class:

major

3'SS Sequence:

TGCCTAAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGAAT

U12 Branch Point Sequence:

ATTCCCTTATCT

Flanking Amino Acid:

LEWKFLFLDHRAPPIIGYLP

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.3

66.7

39.6

Major BPS

66.8

0.42

1.4

75.9

36.3

Major PPT

66.3

0.37

59.6

39.8

Minor 5ss

-2.6

3.2

34.3

Minor BPS

73.5

0.82

1.6

88.33

36.2

Associated Gene:

Gene:

NPAS2

Ensembl Gene ID:

ENSAPLG00000016315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032733

162401785 - 162447870

46086

ENSAPLT00000017044

162401785 - 162452677

50893