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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162537501_162734045_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162537501 - 162734045

Intron Length:

196545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCCGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TATAACTTAATT

Flanking Amino Acid:

RRGCAGNRTLRTNSRRTASR

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.3

47.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

94.4

0.5

91.2

20.6

Minor 5ss

33.6

-1.9

2.9

42.9

44.1

Minor BPS

70.2

0.71

1.5

83.43

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025177

162537416 - 162734587

197172