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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162786391_162789180_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162786391 - 162789180

Intron Length:

2790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTATTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

TTTCTCTTATTA

Flanking Amino Acid:

QQIRRNLYNLVLFVDPVQED

Intron Amino Acid Position:

488

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

85.9

25.4

Major BPS

75.5

0.63

1.1

34.4

Major PPT

81.3

0.71

0.8

82.4

27.8

Minor 5ss

43.9

-0.7

2.8

43.6

Minor BPS

65.6

0.49

1.5

76.26

35.1

Associated Gene:

Gene:

UGGT2

Ensembl Gene ID:

ENSAPLG00000011310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034413

162750123 - 162835046

84924

ENSAPLT00000011839

162750123 - 162835525

85403