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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162795275_162796548_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162795275 - 162796548

Intron Length:

1274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

CTGATATGATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GTCCATTTAATT

Flanking Amino Acid:

VHSEYDEGRKAGATFYKKTG

Intron Amino Acid Position:

606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

60.9

0.25

1.1

59.3

45.1

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

58.4

0.34

1.5

70.98

40.2

Associated Gene:

Gene:

UGGT2

Ensembl Gene ID:

ENSAPLG00000011310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034413

162750123 - 162835046

84924

ENSAPLT00000011839

162750123 - 162835525

85403