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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162818231_162824175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162818231 - 162824175

Intron Length:

5945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTTCCCCTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCCCCTCACA

Flanking Amino Acid:

GKSEEIYQVFSHEGTDSVAD

Intron Amino Acid Position:

1160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

83.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.2

0.72

0.7

76.4

25.7

Minor 5ss

43.2

-0.7

2.9

61.1

37.5

Minor BPS

58.3

0.26

2.1

77.88

38.5

Associated Gene:

Gene:

UGGT2

Ensembl Gene ID:

ENSAPLG00000011310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011839

162750123 - 162835525

85403

ENSAPLT00000034413

162750123 - 162835046

84924