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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162828880_162829219_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162828880 - 162829219

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

GATCTTCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAA

U12 Branch Point Sequence:

GTCACATAAACT

Flanking Amino Acid:

LKNYLSPTFKDVIPHMAKKY

Intron Amino Acid Position:

1278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

0.47

69.9

32.6

Major PPT

0.56

0.9

66.4

40.4

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

49.9

0.08

70.79

45.5

Associated Gene:

Gene:

UGGT2

Ensembl Gene ID:

ENSAPLG00000011310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034413

162750123 - 162835046

84924

ENSAPLT00000011839

162750123 - 162835525

85403